Protein Bagels With Whole Wheat Flour

Name: Protein Bagels With Whole Wheat Flour
Prep time: 20 min
Cook time: 25 min
Total time: 45 min
Yield: 8 bagels
Ingredients: 2 cups whole wheat flour; 1 cup Greek yogurt; 1 tablespoon baking powder; 1 teaspoon salt; 1 tablespoon honey or maple syrup; 1/4 cup warm water; 1 egg (for egg wash); Optional toppings: sesame seeds, poppy seeds, everything bagel seasoning

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I’ve always loved bagels, but I wanted a healthier version that still packed a punch in terms of nutrition. This recipe for Protein Bagels with Whole Wheat Flour transforms traditional bagels into a more wholesome option without sacrificing flavor. They’re easy to make at home, and I love how the nutty taste of whole wheat flour complements the chewy texture of bagels. Plus, these protein-rich delights make for a great breakfast or snack that keeps me full and satisfied. Give them a try—you won't regret it!

Created by

Elodie Fairfax

Last updated on 2026-02-02T00:37:36.338Z

As I started experimenting in the kitchen, I discovered that making bagels from scratch was not only fun but incredibly rewarding. I wanted to create a version that didn't compromise on health. Through some trial and error, I found that incorporating whole wheat flour not only added nutrition but also enhanced the flavor. I also like adding Greek yogurt for extra moisture and protein, which keeps the bagels tender.

Once I nailed the method, I realized how versatile these bagels could be. I enjoy topping them with everything from avocado to smoked salmon, and sometimes I even throw some seeds into the dough for an extra crunch. Baking with whole ingredients always inspires me, and these bagels are proof that healthy can be delicious!

        Why You Will Love This Recipe
        Packed with protein to fuel your day
Wholesome and nutty flavor from whole wheat flour
Easy to customize with your favorite toppings
Healthy alternative to store-bought bagels

      

Understanding Whole Wheat Flour

Whole wheat flour is a fantastic alternative to all-purpose flour when making bagels, as it adds a rich, nutty flavor and more nutrients. The higher fiber content helps keep you satisfied longer. When you use whole wheat flour, the dough may require slightly more liquid than with regular flour, so don’t hesitate to adjust the warm water as needed. Aim for a dough that feels slightly tacky but not sticky, ensuring it will hold its shape while baking.

If you’re new to working with whole wheat flour, you may notice a darker color and a coarser texture than all-purpose flour. These characteristics not only contribute to the bagels' taste and nutrition but also enhance the overall chewiness. When mixed properly, the gluten will develop beautifully, giving you that classic bagel texture that pairs perfectly with cream cheese or your favorite spreads.

Perfecting the Bagel Texture

Kneading the dough is a crucial step to achieving that beloved chewy texture. Spend about 5 minutes kneading until the dough is smooth and elastic. Over-kneading can lead to tough bagels, while under-kneading may result in a dense outcome. If you’re not sure, perform the windowpane test: stretch a small piece of dough between your fingers. It should form a thin, translucent membrane without tearing.

As you shape the dough into bagels, ensure that the hole in the center is large enough to prevent them from closing up during baking. A diameter of about 1-2 inches is ideal. Additionally, allow the bagels to rise briefly on the baking sheet after shaping. This resting period helps create a lighter texture and ensures even baking, leading to a crispy outer crust while retaining chewiness inside.

Ingredients

Gather the following ingredients for the perfect Protein Bagels with Whole Wheat Flour:

Ingredients

2 cups whole wheat flour
1 cup Greek yogurt
1 tablespoon baking powder
1 teaspoon salt
1 tablespoon honey or maple syrup
1/4 cup warm water
1 egg (for egg wash)
Optional toppings: sesame seeds, poppy seeds, everything bagel seasoning

Make sure to have everything ready before starting the preparation!

Instructions

Follow these steps to create your own Protein Bagels:

Prepare the Dough

In a large bowl, combine the whole wheat flour, baking powder, and salt. Next, add the Greek yogurt and honey (or maple syrup). Mix until a dough starts to form. If the dough is too dry, gradually add warm water until it reaches the desired consistency.

Knead and Shape

Turn the dough onto a floured surface and knead for about 5 minutes. Divide the dough into 8 equal pieces and roll each piece into a ball. Poke a hole in the center of each ball to shape it into a bagel.

Prepare for Baking

Preheat the oven to 375°F (190°C). Place the bagels on a baking sheet lined with parchment paper. Beat the egg and brush it over the bagels. Sprinkle with optional toppings if desired.

Bake

Bake the bagels in the preheated oven for 25 minutes or until golden brown. Let them cool on a wire rack before serving.

Enjoy your homemade protein-packed bagels!

Pro Tips

For a unique flavor, try adding herbs or spices to the dough. You can also experiment with different types of flours if you want to mix it up a bit.

Serving and Enjoying Your Bagels

Once your bagels come out of the oven and have cooled slightly, they're ready to be enjoyed! Serve them plain or toasted, topped with a layer of cream cheese, avocado, or your favorite nut butter. You can also slice them in half and use them as sandwich bread for a protein-packed lunch. I love experimenting with different toppings; try adding lox and capers for a classic brunch feel.

These bagels are not just for breakfast; they make excellent snacks and can even be part of a healthy meal prep strategy. Store leftover bagels in an airtight container at room temperature for up to three days. If you have a larger batch, freeze them individually wrapped to keep them fresh; simply pop one in the toaster from frozen when you’re ready to eat.

Variations and Customizations

Feel free to customize these bagels to suit your taste! Add spices like garlic powder or onion powder to the dough for a savory twist. For a touch of sweetness, mix in dried fruits or nuts, such as raisins or walnuts. If you love the filling of a bagel but want something different, consider incorporating fresh herbs or cheese into the dough for added flavor and texture.

You can also experiment with the toppings. Besides sesame and poppy seeds, consider everything bagel seasoning, mild cheese, or even a sprinkle of cinnamon sugar for a sweet version. This flexibility ensures that you can enjoy these protein-packed bagels in countless ways, keeping breakfast or snack time interesting and delicious.

Questions About Recipes

→ Can I use regular all-purpose flour instead of whole wheat flour?

Yes, you can use all-purpose flour, but the bagels will be less nutritious and have a different texture.

→ How should I store leftover bagels?

You can keep them in an airtight container at room temperature for up to 2 days or refrigerate them for longer freshness.

→ Can I freeze these bagels?

Absolutely! These bagels freeze well. Just wrap them individually before freezing and reheat in the oven when you're ready to enjoy.

→ What are some tasty toppings I can use?

Some great toppings include cream cheese, smoked salmon, sliced tomatoes, or even nut butter for a sweet treat.